Organic chemistry is the study of carbon compounds.
 Biochemistry is the study of carbon compounds that crawl.
Internet References
Molecular Biology 3
Last Update 3 / 1 / 07

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 Mol Bio 3 Internet Resources Table of Contents
Click on any of the names listed below for information useful in this course.
Cell Organelles (in Mol. Bio 2)
Cellular Respiration
General Biochemistry Info
Photosynthesis
































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General Biochemistry Info --->
<--- General Biochemistry Info
Abbreviations of Biochemical Terms  
About.com Biochemistry Resource About.com Biology Resource
About.com Cell Biology Resource About.com Molecular Biology Resource
Access Excellence Graphics Gallery Alcohol Production 
Anabolism Anatomy of the Stomach
Ask the Experts about Biology (Sci Am) ATP ref #1
ATP ref #2 (can you find the mistake?) Bacterial Biochemistry
Beer Brewing Biochemical Pathways (ExPASy) (see poster in room 14)
Biochemistry Courses Online BiochemNet: Biochemistry Resources
BiochemNet: Biology Resources BiochemNet: General Chem Resources
BiochemNet: Organic Chem Resources BiochemNet: Molecular Genetics Resources
Biochemistry Resources Biological Inorganic Chemistry
Biology Links Gateway (Links2Go) -- Very Cool! Biophysics Textbook Online
BioTech Life Science Resources (Indiana U.) Botany Online
Bread Production  Brewing
Brief Review of Food Chemistry  Cell Drawing [Animal] (VERY COOL!!!)
Cell Transportation Cheese Production 
Chemistry Factoids (Calif. State U.) Chemistry Resources
Chemistry Resources (U. Cal at Berkley) Creatine Phosphate in Muscle Cells
Dictionary of Cell and Molecular Biology Enzymes & Energy (U. Arizona) 
Food Made by Microbial Activities  Fundamental Physiology and Anatomy of the Digestive System
General, Organic & Bio Chemistry International Food Information Council
Introduction to Enzymes Kyoto Encyclopedia of Genes and Genomes (KEGG)
Lactose Synthesis in Cows (U. Illinois) Lithotropic Bacteria (they don't eat carbon-based food)
Martindale's “The Reference Desk” -- oh wow! Martindale's “The Virtual Bioscience Center” -oh wow!
Martindale's “The Virtual Chemistry Center” -oh wow!  MathMol K-12 Activity Page
McGill U. Medical Gateway Medical Biochemistry (Indiana U.)
THE Medical Biochemistry Page <---LOOK
Terre Haute Center for Medical Education (Ind. St. U.)
Medscape
Metabolic Pathways of Biochemistry MIT Biology Hypertextbook
Microbial Genetics and Metabolism Microbiology (MicroTextbook) (U. Wisconsin-Madison)
Molecular Models from Chemistry Molecules R Us
Molecule of the Month (Protein Data Bank)  
Nature NetBioChem
Nitrogen Assimilation (bacterial) dr dNobel Prize Winners for
DeWitt biology courses
Nutrition and Growth of Prokaryotes Nutrient Absorption in the Gastrointestinal Tract
On-Line Biology Book  
Online Macromolecular Museum Organic Chemistry Review
Perfume and Flavor Chemistry (Leffingwell & Associates) Periodic Table of the Elements
Pharmaceutical Information Network Pharmacology Central
Physiology of Digestion (Colo. St. U.) Plant Biochemistry  (U. Kentucky)
Porphyria (defects in hemoglobin synthesis) Priestly, Joseph (A Brief Biography)
RasMol/Chime Molecule Viewing Software Science Daily newsource
Science News Scientific American
Scientific American Explorations Serum Albumen: Carries Fatty Acids in blood
Synthesis of Amino Acids
Synthesis of Fatty Acids and Lipids Synthesis of Nucleotides
The Argus Clearinghouse The NAD-linked Dehydrogenases
The Mining Company Science News Rules of Carbohydrate Nomenclature
WWW Virtual Library: History of Biology WWW Virtual Library: History of Science, Tech, & Medicine
 
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Cellular Respiration ---->
<---- Cellular Respiration
Absorption of Amino Acids and Peptides Absorption of Lipids
Absorption of Monosaccharides Absorption of Water and Electrolytes
Adrenoleukodystrophy (ALD). Alcohol Dehydrogenase (PDB)
  Amino Acid Metabolism (Wash St. U.)
Anaerobic Respiration An Introduction to Metabolism
Animated Glycolysis (U. Virginia) Aspects of fat digestion and metabolism
Ch. 3 of Fats and oils in human nutrition (see below.))
ATP 1 ATP 2
ATP and Biological Energy (On-Line Bio Book) ATP Research Nobel Prize
ATP Synthase (FoF1 Complex) (KEGG) ATP synthesis 1
ATP synthesis 2 Basic Energy Concepts
Bacterial Metabolism Bile Acid Synthesis
Biochemical Energy (Wash. St. U.)  
Biochemical Pathways 
(from Poster in room 14)
Biochemical Pathways (ExPASy) 
(see poster in room 14)
Biochemical Pathways (U Akron) Biochemistry of Metabolism
BiochemNet: Biochemistry Resources Biological Inorganic Chemistry
BioTech Life Science METABOLISM (Indiana U.) Biophysics Textbook Online
Biosynthesis of Carbon compounds Brief Review of Food Chemistry
Carbohydrate Chemisty online Catabolism of Fats (Lipids)
Catabolism of Proteins and Amino Acids Cell Drawing [Animal] (VERY COOL!!!)
Cellular Energy Resources (U. Virginia) <--good! Cellular Metabolism & Fermentation (On-Line Bio Book)
Cellular Respiration Cholesterol Synthesis
Citric Acid Cycle, Respiration, Oxidative Phosphorylation (WSU) Citric Acid Cycle Images
Citric Acid Cycle 2 Creatine & Creatine Phosphate in Muscle Cells
Call to ban creatine (1/25/01) Cytochrome Oxidase
Digestive System Anatomy Digestive Tube Anatomy
Electron Transport (U. Virginia) Electron Transport (bacterial)
Electron Transport / Oxidative Phosphorylation (KEGG) Endosymbiosis and The Origin of Eukaryotes
Energy Luminaries (i.e, Famous Scientists) Extremophiles (Sci American article)
ExPASy Biochemical Pathways Aspects of fat digestion and metabolism
Ch. 3 of Fats and oils in human nutrition (see --> next row column 1.)
Fats and oils in human nutrition  <--HUGE!!
(United Nations and the WHO)
Fatty Acid Oxidation
Fatty Acid (Palmitic Acid) Beta-Oxidation (Saturated Even Chain) Fatty Acid Beta-Oxidation (Saturated Odd Chain)
Fatty Acid Beta-Oxidation 
(Polyunsaturated Chain)
Fermentation (bacterial) 1
Fermentation (bacterial) 2 Fermentation: Bread Baking
Fermentation: Homolactic & Heterolactic Fermentation: Sour Dough Bread
Fermentations of Importance to Humans NoFermentationBread: Use Baking Powder
Gluconeogenesis Glucose Metabolism (Glycolysis) (Wash. St. U.)
Glycogen Phosphorylase (PDB) Glycolysis Links
Glycolysis ala DeWitt  Glucose Combustion Equation Derivations 
ala DeWitt 
Glycolysis Images Glycolytic enzyme pictures
 
Heme biosynthesis and metabolism
Human Biology: Metabolism Problems (U. Arizona) Introduction to Glycolysis (by J. Maber, U. Leeds)
Introduction to Enzymes Krebs Cycle
Krebs Cycle ala DeWitt  Kyoto Encyclopedia of Genes and Genomes (KEGG)
Lactose metabolism Lipid Metabolism (Wash St. U.)
Lipid Metabolism  2 (U. Akron) Lipid Synthesis
Lithotropic Bacteria (they don't eat carbon-based food) Lysosomal Storage Diseases (About.com)
THE Medical Biochemistry Page <--- LOOK Metabolic Pathways of Biochemistry
Metabolic Pathways (KEGG) <--- LOOK! Metabolism in the Well-fed State
Microbial Genetics and Metabolism MIT Biology Hypertextbook: Large Molecules
Mitochondria Mitochondrial Diseases (Myopathies)
United Mitochondrial Disease Foundation Mitochondrial disorders
Mitochondrial DNA Mitochondria: Errors of Fatty acid oxidation
Mitochondrial mysteries demystified ANIMATION Mysteries of the Mitochondrion --- Cool!
Nobel Prizes Important for Molecular Bio 1-4 Non-mitochondrial oxygen comsumption ala DeWitt 
Nucleotide Coenzymes (ATP, AcetylCoA, NADH, FADH2) Overview of Metabolism (U. Virginia)
Overview of the Digestive System  Oxygen Use NOT IN MITOCHONDRIA
Oxidative Phosphorylation: Overview of the Pathway Oxidative Phosphorylation: Chemiosmotic Coupling
Peroxisomes -- includes Lipid Oxidation + others  
Protein Degradation Protein Digestion to Amino Acids  (Wash. St. U.)
Pyruvate Metabolism (Glycolysis) (Wash. St. U.) Rare and Orphan Diseases (About.com)
Reactions and Enzymes (On-Line Bio Book) Regulation of glucose metabolism and Alternate Pathways (WSU)
Sour Dough Bread: Lactate Fermentation
 
Step by Step TCA (Krebs) Cycle (by J. Maber, U. Leeds) The Flow of Food through your GI Tract
The Ubiquitin System for Protein Modification and Degradation The NAD-linked Dehydrogenases
Tripalmitin triglyceride Combustion 
ala DeWitt 
When did eukaryotic cells (cells with nuclei and other internal organelles) first evolve?
Which organelles contain DNA ? see general references also
 
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Photosynthesis---->
<----Photosynthesis
An Introduction to Photosynthesis and Its Applications anthocyanins (reds and purple colors in vacuoles)
Beta-carotene Biochemical Pathways (from Poster in room 14)
BiochemNet: Biochemistry Resources BiochemNet: Biology Resources
Biological Inorganic Chemistry  
Biophysics Textbook Online Biosynthesis of Carbon compounds
Botany Information (About.com) Botany Online
Calvin Cycle Carotene
Carotenoids Carotenoids and xanthophylls in the fall
Carotenoids Online Fact Book Chemiosmosis in Chloroplasts
Chlorophyll Chlorophylls and Carotenoids
Chloropalsts and other Plastids Chloroplast DNA
Cold-loving photosynthetic bacteria Endosymbiosis and The Origin of Eukaryotes
Extremophiles (Sci American article) Fall Color Hotline of the USDA Forest Service
Ferredoxin History of Gas Knowledge
Human Biology: Photosynthesis I  Problems (U. Arizona) Human Biology: Photosynthesis II  Problems (U. Arizona)
Metabolic Pathways (KEGG) <--- LOOK! Microbial Genetics and Metabolism
MIT Biology Hypertextbook: Photosynthesis Nobel Prizes Important for Molecular Bio I-IV
Photosynthesis (PSII, PSI, b6c, CFoCF1) Photosynthesis ANIMATION
Photosynthesis (On-Line Bio Book) Photosynthesis 1
Photosynthesis Equations ala DeWitt  Photosynthesis (KEGG)
Photosynthesis Images  
PHOTOSYNTHESIS ON THE WEB!! Photosynthesis pictures (NYU)
Photosystem I (PDB) cyanobacteria Photosystem II Review
Plant Biochemistry  (U. Kentucky) Plant Cell Walls 1
Plant Cell Walls 2 Plasmodesmata
Reaction Center Nobel Prive 1988 Rubisco (PDB)
The Cell Wall The Photosynthetic Process
The Plant Cell The Role of Light
The Structure of a Plant Cell Virtual Plant Cell
What the Heck is a Chloroplast? Which organelles contain DNA ?
Why do leaves change color in the fall? #1 Why do leaves change color in the fall? #2
Why do leaves change color in the fall? #3 Why do leaves change color in the fall? #4
(This one has very pretty photos!)
Why do leaves change color in the fall? #5 (Sci Am) Why do leaves change color in the fall? #6
Why Leaves Turn Color in the Fall (The Scientist) Why Study Photosynthesis?
  see general references also
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